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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs1968107 chr7:76035372 C/A UPK3B chr7:76139745-76145838:+ 0.7 5.31 2.28E-6 Box Plot
ACC rs1968108 chr7:76034794 A/G UPK3B chr7:76139745-76145838:+ 0.7 5.31 2.28E-6 Box Plot
ACC rs1974871 chr5:96226535 C/T ERAP2 chr5:96211643-96255420:+ 0.8 8.03 1.13E-10 Box Plot
ACC rs1979568 chr1:245192472 T/C EFCAB2 chr1:245133007-245290466:+ 0.66 5.41 1.65E-6 Box Plot
ACC rs1981846 chr5:96268862 C/A ERAP2 chr5:96211643-96255420:+ 0.86 9.07 2.73E-12 Box Plot
ACC rs1993531 chr19:52884886 T/A ZNF880 chr19:52873170-52889048:+ 0.81 7.16 2.79E-9 Box Plot
ACC rs1993862 chr8:71579362 A/G XKR9 chr8:71581600-71702606:+ 0.66 6.72 1.37E-8 Box Plot
ACC rs199499 chr17:44865498 C/T LRRC37A2 chr17:44588877-44633016:+ 0.8 5.1 4.91E-6 Box Plot
ACC rs199558365 chr6:86899705 T/TTTTAC SNHG5 chr6:86370668-86388454:- 0.82 5.48 1.25E-6 Box Plot
ACC rs199809769 chr5:96278938 AAAAG/A ERAP2 chr5:96211643-96255420:+ 0.94 11.24 1.6E-15 Box Plot
ACC rs199818408 chr14:74453706 AT/A LIN52 chr14:74551499-74667938:+ 0.59 6.23 8.25E-8 Box Plot
ACC rs199825117 chr7:76049016 C/CCCTT UPK3B chr7:76139745-76145838:+ 0.73 6.78 1.1E-8 Box Plot
ACC rs2000468 chr22:24241611 G/T GSTT1 chr22:24376133-24384680:- 0.75 7.28 1.76E-9 Box Plot
ACC rs2000468 chr22:24241611 G/T LOC391322 chr22:24373117-24374043:+ 0.73 6.83 9.27E-9 Box Plot
ACC rs200095472 chr19:44993088 G/A ZNF45 chr19:44416781-44439430:- 1.23 5.75 4.84E-7 Box Plot